Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc13a3Solute carrier family 13 member 3. (578 aa)    
Predicted Functional Partners:
mlycd
Malonyl-CoA decarboxylase.
    
 0.674
slc30a5
Solute carrier family 30 member 5.
  
 
 0.670
slc33a1
Solute carrier family 33 member 1.
     
 0.546
slc1a5
Amino acid transporter.
    
 0.451
LOC106936268
Amino acid transporter.
    
 0.451
LOC106963019
Amino acid transporter.
    
 0.451
LOC106940046
Amino acid transporter.
    
 0.451
slc1a2
Amino acid transporter.
    
 0.451
LOC106953454
Amino acid transporter.
    
 0.451
slc1a4
Solute carrier family 1 member 4.
    
 0.451
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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