tbc1d31 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

tbc1d31

TBC1 domain family, member 31. (1060 aa)

Predicted Functional Partners:

LOC106954136

0.990

ENSPLAP00000017806

0.990

ENSPLAP00000030866

0.990

ENSPLAP00000030875

0.990

dctn2

0.889

pla2g4a

0.836

fam193b

0.809

dctn1

0.809

LOC106935494

0.809

rab3gap1

0.804

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000017806	ENSPLAP00000030866	ENSPLAP00000017806	ENSPLAP00000030866	Uncharacterized protein.	Uncharacterized protein.	0.993
ENSPLAP00000017806	ENSPLAP00000030875	ENSPLAP00000017806	ENSPLAP00000030875	Uncharacterized protein.	Uncharacterized protein.	0.994
ENSPLAP00000017806	LOC106954136	ENSPLAP00000017806	ENSPLAP00000012841	Uncharacterized protein.	Intersectin 2b.	0.993
ENSPLAP00000017806	pla2g4a	ENSPLAP00000017806	ENSPLAP00000030218	Uncharacterized protein.	Phospholipase A2.	0.721
ENSPLAP00000017806	tbc1d31	ENSPLAP00000017806	ENSPLAP00000004097	Uncharacterized protein.	TBC1 domain family, member 31.	0.990
ENSPLAP00000030866	ENSPLAP00000017806	ENSPLAP00000030866	ENSPLAP00000017806	Uncharacterized protein.	Uncharacterized protein.	0.993
ENSPLAP00000030866	ENSPLAP00000030875	ENSPLAP00000030866	ENSPLAP00000030875	Uncharacterized protein.	Uncharacterized protein.	0.998
ENSPLAP00000030866	LOC106954136	ENSPLAP00000030866	ENSPLAP00000012841	Uncharacterized protein.	Intersectin 2b.	0.993
ENSPLAP00000030866	pla2g4a	ENSPLAP00000030866	ENSPLAP00000030218	Uncharacterized protein.	Phospholipase A2.	0.721
ENSPLAP00000030866	tbc1d31	ENSPLAP00000030866	ENSPLAP00000004097	Uncharacterized protein.	TBC1 domain family, member 31.	0.990
ENSPLAP00000030875	ENSPLAP00000017806	ENSPLAP00000030875	ENSPLAP00000017806	Uncharacterized protein.	Uncharacterized protein.	0.994
ENSPLAP00000030875	ENSPLAP00000030866	ENSPLAP00000030875	ENSPLAP00000030866	Uncharacterized protein.	Uncharacterized protein.	0.998
ENSPLAP00000030875	LOC106954136	ENSPLAP00000030875	ENSPLAP00000012841	Uncharacterized protein.	Intersectin 2b.	0.993
ENSPLAP00000030875	pla2g4a	ENSPLAP00000030875	ENSPLAP00000030218	Uncharacterized protein.	Phospholipase A2.	0.721
ENSPLAP00000030875	tbc1d31	ENSPLAP00000030875	ENSPLAP00000004097	Uncharacterized protein.	TBC1 domain family, member 31.	0.990
LOC106935494	dctn2	ENSPLAP00000027461	ENSPLAP00000028429	Dynactin 1a.	Dynactin 2 (p50).	0.990
LOC106935494	tbc1d31	ENSPLAP00000027461	ENSPLAP00000004097	Dynactin 1a.	TBC1 domain family, member 31.	0.809
LOC106954136	ENSPLAP00000017806	ENSPLAP00000012841	ENSPLAP00000017806	Intersectin 2b.	Uncharacterized protein.	0.993
LOC106954136	ENSPLAP00000030866	ENSPLAP00000012841	ENSPLAP00000030866	Intersectin 2b.	Uncharacterized protein.	0.993
LOC106954136	ENSPLAP00000030875	ENSPLAP00000012841	ENSPLAP00000030875	Intersectin 2b.	Uncharacterized protein.	0.993