Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cgref1EF-hand domain-containing protein. (218 aa)    
Predicted Functional Partners:
cgrrf1
Cell growth regulator with ring finger domain 1.
      
 0.847
LOC106955967
EF-hand and coiled-coil domain containing 1.
      
 0.525
ENSPLAP00000022041
EF-hand domain (C-terminal) containing 2.
      
 0.522
LOC106941594
Hexosyltransferase.
      
 0.512
med30
Mediator complex subunit 30.
      
 0.498
pcnp
PEST proteolytic signal containing nuclear protein.
      
 0.498
cct6a
Chaperonin containing TCP1, subunit 6A (zeta 1).
      
 0.498
dtymk
Deoxythymidylate kinase (thymidylate kinase).
      
 0.493
LOC106962422
Solute carrier family 25 member 39; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.456
LOC106958187
Cell cycle associated protein 1a.
      
 0.452
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (16%) [HD]