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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cgref1EF-hand domain-containing protein. (218 aa)    
Predicted Functional Partners:
cgrrf1
Cell growth regulator with ring finger domain 1.
      
 0.553
LOC106958187
Cell cycle associated protein 1a.
      
 0.522
caprin1
Cell cycle associated protein 1b.
      
 0.522
med30
Mediator complex subunit 30.
      
 0.521
dtymk
Deoxythymidylate kinase (thymidylate kinase).
      
 0.521
LOC106962422
Solute carrier family 25 member 39; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.521
pcnp
PEST proteolytic signal containing nuclear protein.
      
 0.521
cct6a
Chaperonin containing TCP1, subunit 6A (zeta 1).
      
 0.521
fpgs
Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.
      
 0.515
cct8
Chaperonin containing TCP1, subunit 8 (theta).
      
 0.514
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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