Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106955766Uncharacterized protein. (393 aa)    
Predicted Functional Partners:
ENSPLAP00000011007
IGv domain-containing protein.
   
  
 0.912
LOC106963865
Ig-like domain-containing protein.
    
 0.866
LOC106947304
Ig-like domain-containing protein.
    
 0.866
LOC106958332
Ig-like domain-containing protein.
    
 0.866
LOC106963869
Ig-like domain-containing protein.
    
 0.866
LOC106961813
Ig-like domain-containing protein.
    
 0.866
ENSPLAP00000022684
Ig-like domain-containing protein.
  
 
 0.792
ENSPLAP00000007405
Fibrinogen C-terminal domain-containing protein.
    
 
 0.786
LOC106963866
Ig-like domain-containing protein.
  
 
 0.785
ENSPLAP00000004000
Ig-like domain-containing protein.
   
 
 0.784
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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