STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tnfrsf1aTumor necrosis factor receptor superfamily, member 1a. (378 aa)    
Predicted Functional Partners:
tradd
Tnfrsf1a-associated via death domain.
    
 0.998
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.990
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 0.989
ENSPLAP00000029102
Uncharacterized protein.
   
 0.989
sharpin
SHANK-associated RH domain interacting protein.
    
 0.987
traf2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.987
LOC106956159
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.986
LOC106947210
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.985
birc2
Baculoviral IAP repeat containing 2.
    
 0.980
rnf31
Ring finger protein 31.
    
 0.973
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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