STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106934498Uncharacterized protein. (449 aa)    
Predicted Functional Partners:
acot8
Acyl-CoA thioesterase 8.
    
 0.917
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.911
gad2
Glutamate decarboxylase 2.
  
 
  0.898
LOC106947629
Cysteine sulfinic acid decarboxylase.
  
 
  0.898
LOC106936237
Sterol carrier protein 2b.
    
 0.873
LOC106963118
Uncharacterized protein.
  
 
  0.853
gad1
Glutamate decarboxylase 1a.
  
 
  0.853
ENSPLAP00000003250
Uncharacterized protein.
     
 0.742
acot7
Acyl-CoA thioesterase 7.
  
 
 0.739
ENSPLAP00000025512
Uncharacterized protein.
  
 
 
0.723
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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