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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106947862Ankyrin repeat domain 24. (963 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81 homolog.
    
 0.670
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.662
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.643
ENSPLAP00000004415
C1q and TNF related 4.
    
 0.632
LOC106938010
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.600
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.600
REL
REL proto-oncogene, NF-kB subunit.
   
 0.600
ift88
Intraflagellar transport 88 homolog.
   
 0.596
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.593
LOC106940681
Fleer.
    
 0.593
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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