Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106939414Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (207 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.923
eif4g3
Eukaryotic translation initiation factor 4 gamma, 3a.
   
 0.901
ncbp2
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.883
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 0.874
ENSPLAP00000017949
MIF4G domain-containing protein.
   
 0.874
LOC106938190
Uncharacterized protein.
   
 0.874
eif4g2
Eukaryotic translation initiation factor 4, gamma 2a.
   
 0.866
LOC106964947
Eukaryotic translation initiation factor 4, gamma 2b.
   
 0.866
LOC106956119
Eukaryotic translation initiation factor 4A1B; Belongs to the DEAD box helicase family.
   
 0.830
LOC106961893
Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family.
   
 0.830
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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