Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mtfr2Mitochondrial fission regulator 2. (356 aa)    
Predicted Functional Partners:
tatdn2
TatD DNase domain containing 2.
      
 0.610
slc12a8
Solute carrier family 12 member 8.
      
 0.610
ENSPLAP00000014229
Meiotic nuclear divisions 1 homolog (S. cerevisiae).
   
    0.582
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.538
ENSPLAP00000027424
WD repeat domain 18.
   
 0.523
tex10
Testis expressed 10.
    
 0.513
slc25a46
Solute carrier family 25 member 46; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
 
   0.491
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
 0.447
gnl3
Guanine nucleotide binding protein-like 3 (nucleolar).
   
  0.444
gnl3l
Guanine nucleotide binding protein-like 3 (nucleolar)-like.
   
  0.444
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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