STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106952836Transmembrane protein 189. (275 aa)    
Predicted Functional Partners:
cept1
Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.954
selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.954
LOC106952860
Ubiquitin-conjugating enzyme E2 variant 1.
 
  
  0.942
LOC106963665
Si:ch211-212o1.2.
  
  
 
0.909
LOC106949028
Phospholipase A(2).
     
 0.905
ENSPLAP00000016375
Phospholipase A(2).
     
 0.894
ENSPLAP00000029890
Phospholipase A(2).
     
 0.894
LOC106936530
UBIQUITIN_CONJUGAT_2 domain-containing protein.
 
  
  0.793
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
 
  
  0.788
ENSPLAP00000001003
Ubiquitin-like domain-containing protein.
    
 0.729
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.