STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000004211Codanin 1. (763 aa)    
Predicted Functional Partners:
PRDM15
PR/SET domain 15.
   
    0.731
LOC106946595
Anti-silencing function 1Ba histone chaperone.
    
 
 0.727
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 
 0.727
LOC106955988
Zgc:154061.
    
 
 0.611
zwilch
Zwilch kinetochore protein.
      
 0.541
EPS15L1
Epidermal growth factor receptor pathway substrate 15 like 1.
      
 0.528
LOC106935181
Si:dkey-71b5.7.
    
 
 0.525
il13ra2
Interleukin 13 receptor, alpha 2.
      
 0.491
ipo4
Importin 4.
    
 
 0.470
ENSPLAP00000017382
Uncharacterized protein.
    
 
 0.470
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.