Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
emp2Epithelial membrane protein 2. (165 aa)    
Predicted Functional Partners:
EMP1
Uncharacterized protein.
  
  
 
0.902
itgb3
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
itgb6
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
itgb5
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
LOC106950752
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
itgb1
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
itgb8
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
LOC106962609
Centrosomal protein 131.
      
 0.655
LOC106956423
Metadherin a.
      
 0.644
LOC106964224
KN motif and ankyrin repeat domains 4.
      
 0.561
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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