STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
farp2FERM, RhoGEF and pleckstrin domain protein 2. (1055 aa)    
Predicted Functional Partners:
LOC106952231
Uncharacterized protein.
    
 0.957
CDC42
Cell division cycle 42.
    
 0.905
LOC106964683
Cell division cycle 42.
    
 0.905
SRC
Tyrosine-protein kinase.
    
  0.903
LOC106954618
Tyrosine-protein kinase.
    
  0.903
LOC106951125
Uncharacterized protein.
    
 0.902
LOC106951123
Uncharacterized protein.
    
 0.902
nrp1
Neuropilin; Belongs to the neuropilin family.
     
 0.634
LOC106961710
PIPK domain-containing protein.
     
 0.627
LOC106949671
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a.
     
 0.627
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.