Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ccdc34Zgc:153293. (329 aa)    
Predicted Functional Partners:
rabl2a
RAB, member of RAS oncogene family-like 2.
    
 0.826
ENSPLAP00000000084
Small nuclear ribonucleoprotein polypeptide F.
   
 
 0.748
zmat5
Zinc finger, matrin-type 5.
    
 
 0.729
rbm34
Uncharacterized protein.
    
 0.722
ccdc77
Coiled-coil domain containing 77.
   
  
 0.718
LOC106945031
Coiled-coil domain containing 106b.
      
 0.711
LOC106959146
Nuclear envelope integral membrane protein 1.
   
  
 0.690
ENSPLAP00000005575
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
      
 0.681
cep85
Centrosomal protein 85.
      
 0.670
znf367
Zinc finger protein 367.
    
 
 0.668
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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