Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106963924BMERB domain-containing protein. (181 aa)    
Predicted Functional Partners:
dctn4
Dynactin 4.
    
   0.750
DCTN6
Dynactin subunit 6.
    
   0.522
dctn6
Uncharacterized protein.
    
   0.522
fam193b
Family with sequence similarity 193 member B.
    
   0.498
dctn1
Dynactin 1b.
    
   0.498
LOC106935494
Dynactin 1a.
    
   0.498
fopnl
Fgfr1op N-terminal like.
      
 0.412
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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