STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdlbpHigh density lipoprotein binding protein a. (1203 aa)    
Predicted Functional Partners:
rack1
Receptor for activated C kinase 1.
   
 
 0.788
eef1g
Eukaryotic translation elongation factor 1 gamma; Belongs to the GST superfamily.
   
   0.703
dnajc2
DnaJ (Hsp40) homolog, subfamily C, member 2.
   
   0.673
wdr31
WD repeat domain 31.
   
 
 0.659
LOC106938462
Uncharacterized protein.
     
 0.655
LOC106938461
Uncharacterized protein.
     
 0.655
LOC106962490
Zgc:153993.
      
 0.590
ENSPLAP00000026153
CARD domain-containing protein.
    
 
 0.576
vars2
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.574
sae1
SUMO1 activating enzyme subunit 1.
    
 
 0.553
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.