STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106938800Uncharacterized protein. (624 aa)    
Predicted Functional Partners:
nup214
Nup214_FG domain-containing protein.
     
 0.637
rae1
Ribonucleic acid export 1.
   
 
  0.621
nup50
Nucleoporin 50.
     
 0.555
nxt2
Nuclear transport factor 2-like export factor 2.
     
 0.520
nup210
Nucleoporin 210.
     
 0.501
ENSPLAP00000014610
Si:ch211-81n22.1.
      
 0.497
xpo7
Exportin 7.
    
 
 0.491
ndc1
NDC1 transmembrane nucleoporin.
   
 
  0.462
nup133
Nucleoporin 133.
   
 
 0.449
LOC106937255
Uncharacterized protein.
  
  
  0.440
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.