STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nbasNeuroblastoma amplified sequence. (1602 aa)    
Predicted Functional Partners:
LOC106943426
Zw10 kinetochore protein.
    
 0.986
rint1
RAD50 interactor 1.
    
 0.981
stx18
Syntaxin 18.
    
 0.981
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.979
ENSPLAP00000017815
Uncharacterized protein.
 
     0.929
napg
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
    
 0.877
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
   
 0.873
snx15
Sorting nexin 15.
    
 0.862
LOC106955701
BCL2 interacting protein 1b.
    
 0.833
LOC106953471
BCL2 interacting protein 1a.
    
 0.833
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.