STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tra2bTransformer 2 beta homolog. (279 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3b.
   
 0.925
LOC106953557
RRM domain-containing protein.
   
 0.925
LOC106951095
Serine and arginine rich splicing factor 7a.
   
 0.907
srsf7
Serine and arginine rich splicing factor 7b.
   
 0.907
srsf2
Serine and arginine rich splicing factor 2a.
  
0.905
LOC106949371
Serine and arginine rich splicing factor 9.
   
 0.895
srsf10
Serine and arginine rich splicing factor 10.
   
0.888
LOC106947525
Uncharacterized protein.
   
 0.881
LOC106947524
Serine/arginine-rich splicing factor 1.
   
 0.881
LOC106955036
Uncharacterized protein.
   
0.881
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.