Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106964629THAP-type domain-containing protein. (196 aa)    
Predicted Functional Partners:
prkar2b
Protein kinase cAMP-dependent type II regulatory subunit beta.
   
 0.756
prkar1b
Protein kinase, cAMP-dependent, regulatory, type I, beta.
   
 0.756
prkar1a
Protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b.
   
 0.756
LOC106960336
Protein kinase, cAMP-dependent, regulatory, type II, alpha, B.
   
 0.756
LOC106947408
Protein kinase, cAMP-dependent, regulatory, type II, alpha A.
   
 0.756
sufu
Suppressor of fused homolog.
    
 0.719
pkia
Uncharacterized protein.
   
 
 0.715
pln
Si:ch211-270g19.5.
    
  0.701
treh
Trehalase.
   
 
 0.665
stk36
Serine/threonine kinase 36 (fused homolog, Drosophila).
    
  0.625
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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