Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mfap1Microfibril associated protein 1. (440 aa)    
Predicted Functional Partners:
prpf38a
Pre-mRNA processing factor 38A.
   
 0.998
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
 0.994
zmat2
Zinc finger, matrin-type 2.
   
 0.993
UBL5
Ubiquitin like 5.
    
 0.986
prpf6
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
   
 0.981
LOC106948266
Uncharacterized protein.
   
 0.977
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
   
 0.977
SNIP1
Smad nuclear interacting protein 1.
   
 
 0.975
bud13
BUD13 homolog.
   
 
 0.971
prpf3
PRP3 pre-mRNA processing factor 3 homolog (yeast).
   
 0.963
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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