STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000004366Teleost multiple tissue opsin 3b; Belongs to the G-protein coupled receptor 1 family. (351 aa)    
Predicted Functional Partners:
LOC106948452
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.601
LOC106952340
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.582
LOC106938736
S-antigen; retina and pineal gland (arrestin) a.
   
 0.576
ARR3
Arrestin 3.
   
 0.576
LOC106951493
S-antigen; retina and pineal gland (arrestin) b.
   
 0.576
ENSPLAP00000013992
Arrestin 3a, retinal (X-arrestin).
   
 0.576
LOC106938860
Arrestin, beta 2a.
   
 0.576
LOC106941570
Arrestin, beta 1.
   
 0.576
LOC106955270
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.570
LOC106947790
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.570
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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