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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106952460Carboxypeptidase A4. (401 aa)    
Predicted Functional Partners:
lxn
Latexin.
    
 
 0.688
LOC106958779
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
 0.602
nol7
Nucleolar protein 7.
      
 0.594
pex5l
Peroxisomal biogenesis factor 5-like a.
      
 0.594
nop9
Uncharacterized protein.
      
 0.594
rfwd3
Ring finger and WD repeat domain 3.
      
 0.594
LOC106958778
Elastase 2; Belongs to the peptidase S1 family.
  
 
 0.592
ENSPLAP00000005464
Peptidase S1 domain-containing protein.
  
 
 0.590
LOC106957078
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
 
 0.590
LOC106938996
Zgc:112285; Belongs to the peptidase S1 family.
  
 
 0.590
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.