STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000004375Protein kinase domain-containing protein. (242 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1b.
    
0.784
ENSPLAP00000030869
Uncharacterized protein.
    
 0.784
LOC106945532
Si:ch73-335l21.4.
    
 0.768
ENSPLAP00000023675
C2 domain-containing protein.
 
      0.729
map3k3
Mitogen-activated protein kinase kinase kinase 3.
    
 0.699
LOC106948891
Mitogen-activated protein kinase kinase kinase 22.
    
 0.699
LOC106949502
Mitogen-activated protein kinase kinase kinase 2.
    
 0.699
ENSPLAP00000018886
Mitogen-activated protein kinase kinase kinase 19.
    
 0.699
hras
HRas proto-oncogene, GTPase a.
   
 0.692
LOC106936569
RAS related.
   
 0.692
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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