STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
caskUncharacterized protein; Belongs to the MAGUK family. (920 aa)    
Predicted Functional Partners:
LOC106945759
Erythrocyte membrane protein band 4.1 like 4B.
   
 0.991
epb41l5
Erythrocyte membrane protein band 4.1 like 5.
   
 0.991
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.991
LOC106948445
FERM domain-containing protein.
   
 0.991
LOC106951829
Uncharacterized protein.
   
 0.991
lin7c
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.982
lin7a
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.982
ENSPLAP00000014380
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.982
LOC106961236
Amyloid beta (A4) precursor protein-binding, family A, member 2b.
   
 0.967
LOC106958146
Amyloid beta (A4) precursor protein-binding, family A, member 2a.
   
 0.967
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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