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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palb2PALB2_WD40 domain-containing protein. (1340 aa)    
Predicted Functional Partners:
brca2
BRCA2 DNA repair associated.
   
 0.999
ndufb9
NADH:ubiquinone oxidoreductase subunit B9; Belongs to the complex I LYR family.
   
 0.997
ndufs3
NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family.
  
 0.997
ENSPLAP00000007661
Malonyl CoA:ACP acyltransferase (mitochondrial).
  
 0.997
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
 0.997
brca1
Uncharacterized protein.
    
 0.997
ndufb10
NADH:ubiquinone oxidoreductase subunit B10.
   
 0.997
ndufa12
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.997
ndufa5
NADH:ubiquinone oxidoreductase subunit A5.
   
 0.996
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.996
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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