Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106961966Fascin. (491 aa)    
Predicted Functional Partners:
ENSPLAP00000008956
Espin like a.
    
 0.682
espn
Espin.
    
 0.682
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.611
ebi3
Uncharacterized protein.
      
 0.517
serpinf2
SERPIN domain-containing protein; Belongs to the serpin family.
      
 0.508
LOC106941820
Uncharacterized protein.
     
 0.499
LOC106965188
FERM domain-containing protein.
     
 0.478
RDX
Radixin.
     
 0.478
rfc4
Replication factor C (activator 1) 4.
    
   0.476
rps27a
Ribosomal protein S27a.
    
   0.476
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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