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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106961966Fascin. (491 aa)    
Predicted Functional Partners:
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
     
 0.649
LOC106965188
FERM domain-containing protein.
     
 0.627
RDX
Radixin.
     
 0.627
serpinf2
SERPIN domain-containing protein; Belongs to the serpin family.
      
 0.593
LOC106957287
SERPIN domain-containing protein; Belongs to the serpin family.
      
 0.553
LOC106941820
Uncharacterized protein.
     
 0.545
ENSPLAP00000008956
Espin like a.
    
 0.515
espn
Espin.
    
 0.515
grxcr1
Glutaredoxin and cysteine rich domain containing 1 a.
     
 0.456
ENSPLAP00000017943
Glutaredoxin and cysteine rich domain containing 1 b.
     
 0.456
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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