Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
hmmrHyaluronan-mediated motility receptor (RHAMM). (1051 aa)    
Predicted Functional Partners:
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.807
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
 0.785
sh3pxd2b
SH3 and PX domains 2B.
     
 0.753
APP
Amyloid beta precursor protein.
    
 0.738
LOC106940919
Amyloid beta (A4) precursor protein b.
    
 0.738
pif1
ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability.
  
 
 0.720
rad54l
RAD54 like.
    
 0.714
scaf1
SR-related CTD-associated factor 1.
      
 0.709
INSC
INSC spindle orientation adaptor protein.
      
 0.707
neil3
Nei-like DNA glycosylase 3.
  
  
 0.706
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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