STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam204aFamily with sequence similarity 204 member A. (257 aa)    
Predicted Functional Partners:
naa10
N(alpha)-acetyltransferase 10, NatA catalytic subunit.
      
 0.531
mfap3l
Microfibril associated protein 3 like.
      
 0.511
TMEM184C
Transmembrane protein 184C.
      
 0.487
LOC106955478
Transmembrane protein 184C.
      
 0.487
il17rd
Interleukin 17 receptor D.
  
   
 0.471
TMEM179
Transmembrane protein 179.
      
 0.424
smim13
Small integral membrane protein 13.
      
 0.414
rab11fip2
RAB11 family interacting protein 2 (class I).
      
 0.400
ENSPLAP00000013864
Ig-like domain-containing protein.
      
 0.400
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.