Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
slc2a12Solute carrier family 2 member 12; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (585 aa)    
Predicted Functional Partners:
rtraf
RNA transcription, translation and transport factor.
    
 0.625
ddx1
DEAD (Asp-Glu-Ala-Asp) box helicase 1.
    
 0.621
rtcb
RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.
    
 0.603
wwox
WW domain containing oxidoreductase.
    
 0.557
tprkb
Tp53rk binding protein; Belongs to the CGI121/TPRKB family.
      
 0.535
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.531
mrps14
Mitochondrial ribosomal protein S14.
    
 
 0.529
fam110b
Family with sequence similarity 110 member B.
      
 0.527
mrpl43
Mitochondrial ribosomal protein L43.
    
 
 0.522
mrpl15
Mitochondrial ribosomal protein L15.
   
   0.521
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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