Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000004553Uncharacterized protein. (308 aa)    
Predicted Functional Partners:
LOC106955637
Si:ch73-22o12.1.
    
  0.612
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
  0.598
LOC106956946
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
  0.598
ENSPLAP00000014378
Uncharacterized protein.
    
 0.597
LOC106946965
Uncharacterized protein.
    
 0.597
LOC106935365
Afadin, adherens junction formation factor a.
    
 0.597
LOC106946890
Translocase of outer mitochondrial membrane 40 homolog, like.
    
  0.456
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
    
  0.456
ENSPLAP00000020778
PVR cell adhesion molecule related 2 like.
    
  0.456
tomm40
Translocase of outer mitochondrial membrane 40 homolog (yeast).
    
  0.456
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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