Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106941830Uncharacterized protein. (1239 aa)    
Predicted Functional Partners:
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.750
LOC106956112
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.750
LOC106955979
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.750
synrg
Synergin, gamma.
    
 
 0.707
LOC106939773
RNA binding motif protein 12B.
   
  
 0.647
fcf1
FCF1 rRNA-processing protein.
     
 0.644
LOC106960131
Trinucleotide repeat containing adaptor 6C1.
  
   0.634
LOC106938008
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.599
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.599
utp20
UTP20 small subunit processome component.
   
 
  0.597
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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