STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106955740Reticulon. (207 aa)    
Predicted Functional Partners:
LOC106947774
Receptor expression-enhancing protein.
    
 
 0.647
vta1
Vesicle (multivesicular body) trafficking 1.
    
   0.619
LOC106945789
J domain-containing protein.
    
 
 0.575
LOC106948654
GTP cyclohydrolase 2.
    
   0.563
gch1
GTP cyclohydrolase 1.
    
   0.563
snx15
Sorting nexin 15.
    
   0.556
LOC106964602
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
    
  0.549
LOC106961768
Nothepsin; Belongs to the peptidase A1 family.
    
  0.549
LOC106952203
Uncharacterized protein.
    
  0.549
LOC106952199
Uncharacterized protein.
    
  0.549
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.