ENSPLAP00000004599 protein (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPLAP00000004599

Uncharacterized protein. (269 aa)

Predicted Functional Partners:

cd79a

0.830

LOC106964456

0.807

pou2f2

0.700

LOC106955603

0.700

pou2f3

0.700

pou2f1

0.700

pou1f1

0.653

pou6f1

0.554

pou6f2

0.554

LOC106948175

0.537

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000004599	LOC106948175	ENSPLAP00000004599	ENSPLAP00000017983	Uncharacterized protein.	POU domain protein.	0.537
ENSPLAP00000004599	LOC106955603	ENSPLAP00000004599	ENSPLAP00000015533	Uncharacterized protein.	POU domain protein.	0.700
ENSPLAP00000004599	LOC106964456	ENSPLAP00000004599	ENSPLAP00000024932	Uncharacterized protein.	Ig-like domain-containing protein.	0.807
ENSPLAP00000004599	cd79a	ENSPLAP00000004599	ENSPLAP00000005881	Uncharacterized protein.	CD79a molecule, immunoglobulin-associated alpha.	0.830
ENSPLAP00000004599	pou1f1	ENSPLAP00000004599	ENSPLAP00000001891	Uncharacterized protein.	POU domain protein.	0.653
ENSPLAP00000004599	pou2f1	ENSPLAP00000004599	ENSPLAP00000029847	Uncharacterized protein.	POU domain protein.	0.700
ENSPLAP00000004599	pou2f2	ENSPLAP00000004599	ENSPLAP00000011805	Uncharacterized protein.	POU domain protein.	0.700
ENSPLAP00000004599	pou2f3	ENSPLAP00000004599	ENSPLAP00000028477	Uncharacterized protein.	POU domain protein.	0.700
ENSPLAP00000004599	pou6f1	ENSPLAP00000004599	ENSPLAP00000022373	Uncharacterized protein.	POU domain protein.	0.554
ENSPLAP00000004599	pou6f2	ENSPLAP00000004599	ENSPLAP00000025247	Uncharacterized protein.	POU domain protein.	0.554
LOC106948175	ENSPLAP00000004599	ENSPLAP00000017983	ENSPLAP00000004599	POU domain protein.	Uncharacterized protein.	0.537
LOC106955603	ENSPLAP00000004599	ENSPLAP00000015533	ENSPLAP00000004599	POU domain protein.	Uncharacterized protein.	0.700
LOC106964456	ENSPLAP00000004599	ENSPLAP00000024932	ENSPLAP00000004599	Ig-like domain-containing protein.	Uncharacterized protein.	0.807
LOC106964456	cd79a	ENSPLAP00000024932	ENSPLAP00000005881	Ig-like domain-containing protein.	CD79a molecule, immunoglobulin-associated alpha.	0.999
cd79a	ENSPLAP00000004599	ENSPLAP00000005881	ENSPLAP00000004599	CD79a molecule, immunoglobulin-associated alpha.	Uncharacterized protein.	0.830
cd79a	LOC106964456	ENSPLAP00000005881	ENSPLAP00000024932	CD79a molecule, immunoglobulin-associated alpha.	Ig-like domain-containing protein.	0.999
pou1f1	ENSPLAP00000004599	ENSPLAP00000001891	ENSPLAP00000004599	POU domain protein.	Uncharacterized protein.	0.653
pou2f1	ENSPLAP00000004599	ENSPLAP00000029847	ENSPLAP00000004599	POU domain protein.	Uncharacterized protein.	0.700
pou2f2	ENSPLAP00000004599	ENSPLAP00000011805	ENSPLAP00000004599	POU domain protein.	Uncharacterized protein.	0.700
pou2f2	pou2f3	ENSPLAP00000011805	ENSPLAP00000028477	POU domain protein.	POU domain protein.	0.888