Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TLCD3ATLC domain containing 3A. (270 aa)    
Predicted Functional Partners:
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.775
ENSPLAP00000015196
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.584
ppp1r16b
Protein phosphatase 1, regulatory subunit 16B.
    
 
 0.573
ppp4c
Serine/threonine-protein phosphatase.
    
 
 0.560
ENSPLAP00000019960
Uncharacterized protein.
    
 
 0.556
ENSPLAP00000028581
Uncharacterized protein.
    
 
 0.556
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.538
cln8
CLN8 transmembrane ER and ERGIC protein.
      
 0.519
ino80e
INO80 complex subunit E.
    
 
 0.518
wdr90
WD repeat domain 90.
    
 
 0.513
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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