STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106938771N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a. (889 aa)    
Predicted Functional Partners:
glce
Glucuronic acid epimerase b.
   
 0.965
LOC106948413
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.
  
  
 
0.924
LOC106936388
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a.
  
  
 
0.924
LOC106957537
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.666
LOC106960451
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.630
SDC3
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.556
LOC106952390
Glypican 4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.542
ENSPLAP00000006671
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.542
LOC106954947
Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.542
gpc2
Glypican 2; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.542
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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