Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
ENSPLAP00000004658Uncharacterized protein. (56 aa)    
Predicted Functional Partners:
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.519
dlgap1
Discs, large (Drosophila) homolog-associated protein 1b.
   
 
 0.502
LOC106941356
Uncharacterized protein.
   
 
 0.502
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
    
   0.483
lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
      
 0.415
ENSPLAP00000002598
PID domain-containing protein.
   
   0.414
ANKS1A
Ankyrin repeat and sterile alpha motif domain containing 1A.
   
   0.414
anks1b
Ankyrin repeat and sterile alpha motif domain containing 1B.
   
   0.414
rag1
V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...]
      
 0.412
ttc36
Tetratricopeptide repeat domain 36.
      
 0.412
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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