Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ska3Spindle and kinetochore associated complex subunit 3. (596 aa)    
Predicted Functional Partners:
ENSPLAP00000027738
SKA2 domain-containing protein.
   
 0.997
ENSPLAP00000007900
Uncharacterized protein.
   
 0.987
ska1
Uncharacterized protein.
   
 0.987
spc25
SPC25 component of NDC80 kinetochore complex.
   
 0.971
nuf2
UF2 component of NDC80 kinetochore complex.
   
 0.971
ndc80
NDC80 kinetochore complex component.
   
 0.965
ttk
Ttk protein kinase.
   
  
 0.917
spc24
SPC24 component of NDC80 kinetochore complex.
   
 0.912
PPP2R2C
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
   0.891
exo1
Exonuclease 1.
   
  
 0.880
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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