Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ldlrap1Low density lipoprotein receptor adaptor protein 1b. (313 aa)    
Predicted Functional Partners:
LOC106959286
Low density lipoprotein receptor b.
    
 0.979
ldlr
Low density lipoprotein receptor a.
    
 0.979
dab2
DAB adaptor protein 2.
     
0.945
LOC106937876
AP complex subunit beta.
    
 0.942
stn1
CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication.
    
   0.935
ENSPLAP00000002850
Uncharacterized protein.
    
 0.928
LOC106934420
Uncharacterized protein.
    
 0.928
LOC106963810
Low density lipoprotein receptor-related protein 2b.
    
 0.928
lrp2
Low density lipoprotein receptor-related protein 2a.
    
 0.928
lrp4
Low density lipoprotein receptor-related protein 4.
    
 0.928
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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