STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldlrap1Low density lipoprotein receptor adaptor protein 1b. (313 aa)    
Predicted Functional Partners:
LOC106954136
Intersectin 2b.
    
  0.990
ENSPLAP00000017806
Uncharacterized protein.
    
  0.990
ENSPLAP00000030866
Uncharacterized protein.
    
  0.990
ENSPLAP00000030875
Uncharacterized protein.
    
  0.990
dab2
DAB adaptor protein 2.
     
0.960
LOC106959286
Low density lipoprotein receptor b.
    
 0.958
ldlr
Low density lipoprotein receptor a.
    
 0.955
LOC106937876
AP complex subunit beta.
    
 0.939
ENSPLAP00000028678
Low density lipoprotein receptor adaptor protein 1a.
  
  
 
0.904
ENSPLAP00000011944
Si:dkey-71h2.2.
  
  
 
0.889
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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