Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC106951845Protein disulfide-isomerase. (488 aa)    
Predicted Functional Partners:
LOC106936274
Calreticulin.
   
 0.973
LOC106951082
Calreticulin.
   
 0.973
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.969
pdia3
Protein disulfide-isomerase.
  
  
 
0.901
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
  
 0.896
LOC106935102
TAP binding protein (tapasin), tandem duplicate 2.
    
 0.892
ENSPLAP00000027138
ANK_REP_REGION domain-containing protein.
  
 0.889
canx
Calnexin.
   
 0.829
ero1a
Endoplasmic reticulum oxidoreductase alpha.
   
 0.826
ero1b
Endoplasmic reticulum oxidoreductase beta.
   
 0.826
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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