Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106936648Homeobox domain-containing protein. (381 aa)    
Predicted Functional Partners:
hhex
Homeobox domain-containing protein.
    
 
 0.512
LOC106965135
Pre-B-cell leukemia homeobox 2.
    
 0.482
ENSPLAP00000013101
PBC domain-containing protein.
    
 0.482
pbx1
Homeobox domain-containing protein.
    
 0.482
LOC106962266
Pre-B-cell leukemia homeobox 1a.
    
 0.482
LOC106946690
Pre-B-cell leukemia transcription factor 4.
    
 0.482
LOC106953913
Homeobox domain-containing protein.
    
 0.482
ENSPLAP00000007892
Uncharacterized protein.
    
 0.413
ENSPLAP00000009597
Teashirt zinc finger homeobox 2.
    
 0.413
tshz3
Teashirt zinc finger homeobox 3a.
    
 0.413
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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