STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106940188Heat shock protein, alpha-crystallin-related, b11; Belongs to the small heat shock protein (HSP20) family. (208 aa)    
Predicted Functional Partners:
mapkapk2
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
    
 0.592
mapkapk5
MAPK activated protein kinase 5.
    
 0.592
MAPKAPK3
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
    
 0.592
LOC106953261
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
    
 0.592
bag3
BCL2 associated athanogene 3.
    
 
 0.564
rps27a
Ribosomal protein S27a.
    
  0.464
metrnl
Meteorin like, glial cell differentiation regulator a.
    
 0.414
LOC106963987
Heat shock transcription factor 4.
    
 0.414
LOC106962555
Meteorin like, glial cell differentiation regulator b.
    
 0.414
metrn
Meteorin, glial cell differentiation regulator.
    
 0.414
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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