STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106937352Uncharacterized protein. (748 aa)    
Predicted Functional Partners:
LOC106954136
Intersectin 2b.
    
 0.866
ENSPLAP00000017806
Uncharacterized protein.
    
 0.866
ENSPLAP00000030866
Uncharacterized protein.
    
 0.866
ENSPLAP00000030875
Uncharacterized protein.
    
 0.866
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.862
rab41
RAB41, member RAS oncogene family.
   
 0.843
LOC106960187
RAB6B, member RAS oncogene family.
   
 0.843
rab6b
RAB6B, member RAS oncogene family a.
   
 0.843
rab6a
RAB6A, member RAS oncogene family.
   
 0.843
arfgef2
ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited).
    
 0.842
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.