Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC106960700Dachsous cadherin-related 1a. (3272 aa)    
Predicted Functional Partners:
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
      
 0.849
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.769
LHFPL6
LHFPL tetraspan subfamily member 6.
   
 0.738
fkbpl
FKBP prolyl isomerase like.
    
 
 0.732
LOC106953978
Uncharacterized protein.
    
 0.727
LOC106963833
Junction plakoglobin a.
    
 0.727
ENSPLAP00000016034
Periostin, osteoblast specific factor a.
      
 0.710
fjx1
Four-jointed box kinase 1.
   
 
 0.709
LOC106942766
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.684
LOC106942625
Cytochrome P450, family 21, subfamily A, polypeptide 2; Belongs to the cytochrome P450 family.
      
 0.684
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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