LOC106947262 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC106947262

G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (378 aa)

Predicted Functional Partners:

nts

0.991

nmu

0.825

LOC106954902

0.698

LOC106955270

0.659

LOC106947790

0.659

LOC106963571

0.659

LOC106963572

0.659

mlc1

0.595

agt

0.585

trh

0.577

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC106947262	LOC106947790	ENSPLAP00000004887	ENSPLAP00000005857	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	0.659
LOC106947262	LOC106954902	ENSPLAP00000004887	ENSPLAP00000009527	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Eva-1 homolog Ba (C. elegans).	0.698
LOC106947262	LOC106955270	ENSPLAP00000004887	ENSPLAP00000000830	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	0.659
LOC106947262	LOC106963571	ENSPLAP00000004887	ENSPLAP00000015560	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.659
LOC106947262	LOC106963572	ENSPLAP00000004887	ENSPLAP00000029366	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), alpha 14a.	0.659
LOC106947262	agt	ENSPLAP00000004887	ENSPLAP00000022751	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Angiotensinogen; Belongs to the serpin family.	0.585
LOC106947262	mlc1	ENSPLAP00000004887	ENSPLAP00000016628	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Modulator of VRAC current 1.	0.595
LOC106947262	nmu	ENSPLAP00000004887	ENSPLAP00000014393	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	NMU domain-containing protein.	0.825
LOC106947262	nts	ENSPLAP00000004887	ENSPLAP00000012318	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Neurotensin.	0.991
LOC106947262	trh	ENSPLAP00000004887	ENSPLAP00000031348	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	0.577
LOC106947790	LOC106947262	ENSPLAP00000005857	ENSPLAP00000004887	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.659
LOC106947790	LOC106955270	ENSPLAP00000005857	ENSPLAP00000000830	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	0.543
LOC106947790	LOC106963571	ENSPLAP00000005857	ENSPLAP00000015560	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	Uncharacterized protein.	0.543
LOC106947790	LOC106963572	ENSPLAP00000005857	ENSPLAP00000029366	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	Guanine nucleotide binding protein (G protein), alpha 14a.	0.545
LOC106947790	agt	ENSPLAP00000005857	ENSPLAP00000022751	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	Angiotensinogen; Belongs to the serpin family.	0.562
LOC106947790	nmu	ENSPLAP00000005857	ENSPLAP00000014393	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	NMU domain-containing protein.	0.403
LOC106947790	trh	ENSPLAP00000005857	ENSPLAP00000031348	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	0.440
LOC106954902	LOC106947262	ENSPLAP00000009527	ENSPLAP00000004887	Eva-1 homolog Ba (C. elegans).	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.698
LOC106955270	LOC106947262	ENSPLAP00000000830	ENSPLAP00000004887	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.659
LOC106955270	LOC106947790	ENSPLAP00000000830	ENSPLAP00000005857	Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).	Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).	0.543