ENSPLAP00000004892 protein (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPLAP00000004892

Uncharacterized protein. (1046 aa)

Predicted Functional Partners:

RYR3

0.939

LOC106935502

0.891

LOC106947909

0.885

casq1

0.861

ENSPLAP00000008247

0.846

LOC106947247

0.844

LOC106960988

0.839

LOC106963247

0.788

LOC106936200

0.788

LOC106954010

0.788

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000004892	ENSPLAP00000008247	ENSPLAP00000004892	ENSPLAP00000008247	Uncharacterized protein.	Asp-B-Hydro_N domain-containing protein.	0.846
ENSPLAP00000004892	LOC106935502	ENSPLAP00000004892	ENSPLAP00000012642	Uncharacterized protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.891
ENSPLAP00000004892	LOC106936200	ENSPLAP00000004892	ENSPLAP00000015855	Uncharacterized protein.	Calmodulin.	0.788
ENSPLAP00000004892	LOC106947247	ENSPLAP00000004892	ENSPLAP00000006009	Uncharacterized protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.844
ENSPLAP00000004892	LOC106947909	ENSPLAP00000004892	ENSPLAP00000003452	Uncharacterized protein.	Un-named hu7910.	0.885
ENSPLAP00000004892	LOC106954010	ENSPLAP00000004892	ENSPLAP00000017832	Uncharacterized protein.	Calmodulin.	0.788
ENSPLAP00000004892	LOC106960988	ENSPLAP00000004892	ENSPLAP00000025088	Uncharacterized protein.	Uncharacterized protein.	0.839
ENSPLAP00000004892	LOC106963247	ENSPLAP00000004892	ENSPLAP00000003148	Uncharacterized protein.	Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.	0.788
ENSPLAP00000004892	RYR3	ENSPLAP00000004892	ENSPLAP00000021172	Uncharacterized protein.	Ryanodine receptor 3.	0.939
ENSPLAP00000004892	casq1	ENSPLAP00000004892	ENSPLAP00000022283	Uncharacterized protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.861
ENSPLAP00000008247	ENSPLAP00000004892	ENSPLAP00000008247	ENSPLAP00000004892	Asp-B-Hydro_N domain-containing protein.	Uncharacterized protein.	0.846
ENSPLAP00000008247	LOC106935502	ENSPLAP00000008247	ENSPLAP00000012642	Asp-B-Hydro_N domain-containing protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.908
ENSPLAP00000008247	LOC106947247	ENSPLAP00000008247	ENSPLAP00000006009	Asp-B-Hydro_N domain-containing protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.832
ENSPLAP00000008247	LOC106960988	ENSPLAP00000008247	ENSPLAP00000025088	Asp-B-Hydro_N domain-containing protein.	Uncharacterized protein.	0.713
ENSPLAP00000008247	RYR3	ENSPLAP00000008247	ENSPLAP00000021172	Asp-B-Hydro_N domain-containing protein.	Ryanodine receptor 3.	0.846
ENSPLAP00000008247	casq1	ENSPLAP00000008247	ENSPLAP00000022283	Asp-B-Hydro_N domain-containing protein.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.747
LOC106935502	ENSPLAP00000004892	ENSPLAP00000012642	ENSPLAP00000004892	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Uncharacterized protein.	0.891
LOC106935502	ENSPLAP00000008247	ENSPLAP00000012642	ENSPLAP00000008247	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Asp-B-Hydro_N domain-containing protein.	0.908
LOC106935502	LOC106947247	ENSPLAP00000012642	ENSPLAP00000006009	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	0.909
LOC106935502	LOC106947909	ENSPLAP00000012642	ENSPLAP00000003452	Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.	Un-named hu7910.	0.939