Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrp12Low density lipoprotein receptor-related protein 12. (862 aa)    
Predicted Functional Partners:
LOC106954136
Intersectin 2b.
    
 0.586
ENSPLAP00000017806
Uncharacterized protein.
    
 0.586
ENSPLAP00000030866
Uncharacterized protein.
    
 0.586
ENSPLAP00000030875
Uncharacterized protein.
    
 0.586
gipc1
GIPC PDZ domain containing family, member 1.
    
 
 0.563
srbd1
S1 motif domain-containing protein.
      
 0.538
fkrp
Fukutin related protein.
      
 0.520
LOC106963810
Low density lipoprotein receptor-related protein 2b.
      
 0.509
lrp2
Low density lipoprotein receptor-related protein 2a.
      
 0.509
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 0.506
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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