Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPLAP00000004912Si:ch211-263k4.2. (184 aa)    
Predicted Functional Partners:
prdm16
Si:ch211-263k4.2.
 
      0.858
ZNF516
Zinc finger protein 516.
    
 
 0.788
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 0.701
LOC106959059
Uncharacterized protein.
    
 0.676
tmem26
Transmembrane protein 26a.
      
 0.667
SPDEF
SAM pointed domain containing ETS transcription factor.
    
   0.645
LOC106952819
CCAAT enhancer binding protein beta.
    
 0.638
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.635
prdm11
PR domain containing 11.
    
 
 0.614
PPARA
Peroxisome proliferator-activated receptor alpha b.
    
 0.598
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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