STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
unc50Unc-50 homolog (C. elegans). (257 aa)    
Predicted Functional Partners:
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 
 0.632
LOC106950941
RIC3 domain-containing protein.
      
 0.590
LOC106959116
RIC3 acetylcholine receptor chaperone.
      
 0.588
arfrp1
ADP-ribosylation factor related protein 1.
    
 
 0.578
ENSPLAP00000027300
NIPA magnesium transporter 2.
 
    
 0.558
yif1a
Yip1 interacting factor homolog A (S. cerevisiae).
      
 0.551
akap17a
A kinase (PRKA) anchor protein 17A.
      
 0.541
gosr1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
  
 0.525
ENSPLAP00000029696
UDP-glucuronate decarboxylase 1.
      
 0.521
ARHGAP6-2
Rho GTPase activating protein 6.
      
 0.511
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.