STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000005009Rad21_Rec8_N domain-containing protein. (125 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes protein.
   
 0.993
smc1a
Structural maintenance of chromosomes protein.
   
 0.991
LOC106952458
Structural maintenance of chromosomes protein.
   
 0.991
espl1
Extra spindle pole bodies like 1, separase.
   
 0.972
LOC106964075
Stromal antigen 2b.
   
 0.971
stag1
Stromal antigen 1a.
   
 0.971
LOC106957921
Stromal antigen 2a.
   
 0.971
stag3
SCD domain-containing protein.
   
 0.970
LOC106964230
Si:ch211-269e2.1.
   
 0.962
LOC106934691
Si:ch211-269e2.1.
   
 0.962
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.